1. Ho, Y. et al. Systematic identification
of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature 415 ,
180-183 (2002).
2. Bader, G. D., Heilbut, A., Andrews, B., Tyers, M.,
Hughes, T. & Boone, C. Functional genomics and proteomics: charting
a multidimensional map of the yeast cell. Trends in Cell Biology 13 ,
344-356 (2003).
3. Eisenberg, D., Marcotte, E. M., Xenarios, I. & Yeates,
T. O. Protein function in the post-genomic era. Nature 405 ,
823-826 (2000).
4. Lander, E. S. et al. Initial
sequencing and analysis of the human genome. Nature 409 , 860-921 (2001).
5. Venter, J. C. et al. The sequence
of the human genome. Science 291 ,
1304-1351 (2001).
6. Koonin, E. V. & Galperin,
M. Y. Prokaryotic genomes: the emerging paradigm of genome-based
microbiology. Curr. Opin.
Genetics and Development 7 , 757-763 (1997).
7. Schoolnik, G. K. Functional and
comparative genomics of pathogenic bacteria. Curr. Opin. Microbiol. 5 ,
20-26 (2002).
8. Southward, C. M. & Surette,
M. G. The dynamic microbe: green fluorescent protein brings bacteria
to light. Molecular
Microbiology 45 , 1191-1196 (2002).
9. Clemons, P. A., Koehler, A. N., Wagner, B. K., Sprigings,
T. G., Spring, D. R., King, R. W., Schreiber, S. L. & Foley, M.
A. A one-bead, one-stock solution approach to chemical genetics: part
2. Chem
Biol 8 , 1183-1195 (2001).
10. Jansen, R., Yu, H., Greenbaum, D.,
Kluger, Y., Krogan, N. J., Chung, S., Emili, A., Snyder, M., Greenblatt,
J. F. & Gerstein,
M. A Bayesian networks approach for predicting protein-protein interactions
from genomic data. Science 302 , 449-453 (2003).
11. Uetz, P., Giot, L., Cagney, G., Mansfield,
T. A., Judson, R. S., Knight, J. R., Lockshon, D., Narayan, V.,
Srinivasan, M., Pochart, P., Qureshi-Emili, A., Li, Y., Godwin, B., Conover,
D., Kalbfleisch, T., Vijayadamodar, G., Yang, M., Johnston, M., Fields,
S. & Rothberg,
J. M. A comprehensive analysis of protein-protein interactions
in saccharomyces cerevisiae. Nature 403 , 623-627 (2000).
12. Gavin, A. C. et al. Functional organization of the yeast
proteome by systematic analysis of protein complexes. Nature 415 ,
141-147 (2002).
13. Botstein, D. & Risch, N. Discovering
genotypes underlying human phenotypes: past successes for mendelian
disease, future approaches for complex disease. Nat.Genet. 33 Suppl , 228-237
(2003).
14. Zhang, C. & Kim, S. H. Overview
of structural genomics: from structure to function. Curr. Opin. Chem. Biol. 7 ,
28-32 (2003).
15. Goldsmith-Fischman, S. & Honig,
B. Structural genomics: computational methods for structure analysis. Prot. Sci. 12 ,
1813 (2003).
16. Vitkup, D., Melamud, E., Moult, J. & Sander,
C. Completeness in structural genomics. Nat.Struct.Biol. 8 , 559-566
(2001).
17. Baker, D. & Sali, A. Protein structure
prediction and structural genomics. Science 294 , 93-96 (2001).
18. Sali, A. NIH Workshop on Structural Proteomics of Biological
Complexes. Structure 11 , 1043-1047 (2003).
